Starting with Tomcat 5, it is now possible to configure which Tomcat internal package are protected against package definition and access.
The Default Properties File
The default $CATALINA_BASE/conf/catalina.properties file looks like this:
#
# List of comma-separated packages that start with or equal this string
# will cause a security exception to be thrown when
# passed to checkPackageAccess unless the
# corresponding RuntimePermission (“accessClassInPackage.”+package) has
# been granted.
package.access=sun.,org.apache.catalina.,org.apache.coyote.,org.apache.tomcat.,
org.apache.jasper.
#
# List of comma-separated packages that start with or equal this string
# will cause a security exception to be thrown when
# passed to checkPackageDefinition unless the
# corresponding RuntimePermission (“defineClassInPackage.”+package) has
# been granted.
#
# by default, no packages are restricted for definition, and none of
# the class loaders supplied with the JDK call checkPackageDefinition.
#
package.definition=sun.,java.,org.apache.catalina.,org.apache.coyote.,
org.apache.tomcat.,org.apache.jasper.
Once you have configured the catalina.properties file for use with a SecurityManager, remember to re-start Tomcat.